Exemplar DOI
10.1601/ex.8092
Strain Identifiers
IFO 12017 (=LMG 10399 =ATCC 13125 =LMG 10344 =DSM 2366 =JCM 7457 =HIM 762-3 =NCIB 9290 =LMG 10339)
IFO 12017
LMG 10399
ATCC 13125
LMG 10344
DSM 2366
JCM 7457
HIM 762-3
NCIB 9290
LMG 10339
Taxonomic Placements



Type Status
This is the type strain for (Payza and Korn 1956) Steyn et al. 1998 emend. Zhou et al. 2012, (Payza and Korn 1956) Christensen 1980, (Payza and Korn 1956) Takeuchi and Yokota 1993 and Payza and Korn 1956 (Approved Lists 1980).
16S gene
AJ438172
Feature
Image
10.1601/ex.8092/image/1
Chromosome
CP001681
GOLD Card
Gc01041
Citation
When referring to this Abstract, please use its Digital Object Identifier.
Exemplar Abstract for IFO 12017 (=LMG 10399 =ATCC 13125 =LMG 10344 =DSM 2366 =JCM 7457 =HIM 762-3 =NCIB 9290 =LMG 10339). Retrieved . https://doi.org/10.1601/ex.8092.
Source File
The effective publication lists LMG 10344 as a subculture of LMG 10399 and asserts both as type deposits. However, the protolog states that LMG 10339 is the type deposit. The LMG strains are no longer available, so it is not possible to confirm which of those accessions were type deposits. ATCC appears to have the most authoritative record of this strain.
This information was last reviewed on November 1, 2016.

References

  1. Christensen P. Description and taxonomic status of Cytophaga heparina, Payza and Korn comb. nov., Basonym: Flavobacterium heparinum Payza and Korn 1956. Int J Syst Bacteriol 1980; 30:473-475. https://doi.org/10.1099/00207713-30-2-473.
  2. List Editor. Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 47. Int J Syst Bacteriol 1993; 43:864-865. https://doi.org/10.1099/00207713-43-4-864.
  3. Han C, Spring S, Lapidus A, Glavina Del Rio T, Tice H, Copeland A, Cheng J-F, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang Y-J, Jeffries CC, Saunders E, Chertkov O, Brettin T, Göker M, Rohde M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk H-P, Detter JC. Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3T). Stand Genomic Sci 2009; 1:54-62. https://doi.org/10.4056/sigs.22138 [PubMed].
  4. Steyn PL, Segers P, Vancanneyt M, Sandra P, Kersters K, Joubert JJ. Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov. Int J Syst Bacteriol 1998; 48:165-177. https://doi.org/10.1099/00207713-48-1-165 [PubMed].
  5. Skerman VBD, McGowan V, Sneath PHA. Approved Lists of Bacterial Names. Int J Syst Bacteriol 1980; 30:225-420. https://doi.org/10.1099/00207713-30-1-225.
  6. Liolios K, Chen IM, Mavromatis K, Tavernarakis N, Hugenholtz P, Markowitz VM, Kyrpides NC. The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res. 2010; 38:D346-354. https://doi.org/10.1093/nar/gkp848 [PubMed].