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<name doi="10.1601/nm.6321" xmlns="http://namesforlife.com/ns/name">
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      <identifier doi="10.1601/nm.6321" nomenclatural-type-exemplar="10.1601/ex.6321" rank="subspecies" taxon-doi="10.1601/tx.6321">Mycobacterium avium avium</identifier>
      <authority>(Chester 1901) Thorel et al. 1990</authority>
      <status candidatus="false" conserved="false" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
    </name-status-group>
  </nomenclature>
  <events>
    <event date="1990" reference="rid.6795" type="validation" />
    <event date="1990" reference="rid.6795" type="effective-publication" />
  </events>
  <taxon doi="10.1601/tx.6321" rank="subspecies" xmlns="http://namesforlife.com/ns/taxon">
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        <identifier doi="10.1601/nm.6321" nomenclatural-type-exemplar="10.1601/ex.6321" rank="subspecies" taxon-doi="10.1601/tx.6321">Mycobacterium avium avium</identifier>
        <authority>(Chester 1901) Thorel et al. 1990</authority>
        <status candidatus="false" conserved="false" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
    <nomenclatural-type nomenclatural-type-exemplar="10.1601/ex.6321" xmlns="http://namesforlife.com/ns/common" />
    <taxonomic-equivalence />
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      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.0" rank="root" taxon-doi="10.1601/tx.0">Universal Root</identifier>
          <authority>Woese et al. 1990</authority>
          <status candidatus="false" conserved="false" current-name="Universal Root" current-name-doi="10.1601/nm.0" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
        </name-status-group>
      </nomenclature>
      <ancestor doi="10.1601/tx.419" rank="domain">
        <nomenclature xmlns="http://namesforlife.com/ns/common">
          <name-status-group>
            <identifier doi="10.1601/nm.419" rank="domain" taxon-doi="10.1601/tx.419">Bacteria</identifier>
            <authority>(None 2015) Woese et al. 1990</authority>
            <status candidatus="false" conserved="false" current-name="Bacteria" current-name-doi="10.1601/nm.419" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
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        <ancestor doi="10.1601/tx.5711" rank="phylum">
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              <identifier doi="10.1601/nm.5711" nomenclatural-type="10.1601/tx.5771" nomenclatural-type-exemplar="10.1601/ex.5772" rank="phylum" taxon-doi="10.1601/tx.5711">Actinobacteria</identifier>
              <authority>(sic) Goodfellow 2021 non Actinobacteria Stackebrandt et al. 1997</authority>
              <status candidatus="false" conserved="false" current-name="Actinomycetota" current-name-doi="10.1601/nm.39793" illegitimate="true" is-current="false" rejected="false" revived="false" status-code="NVP" />
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            <name-status-group>
              <identifier doi="10.1601/nm.39793" nomenclatural-type="10.1601/tx.5771" nomenclatural-type-exemplar="10.1601/ex.5772" rank="phylum" taxon-doi="10.1601/tx.5711">Actinomycetota</identifier>
              <authority>corrig. Goodfellow 2021</authority>
              <status candidatus="false" conserved="false" current-name="Actinomycetota" current-name-doi="10.1601/nm.39793" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
            </name-status-group>
            <name-status-group>
              <identifier doi="10.1601/nm.31607" nomenclatural-type="10.1601/tx.5771" nomenclatural-type-exemplar="10.1601/ex.5772" rank="phylum" taxon-doi="10.1601/tx.5711">Actinobacteriota</identifier>
              <authority>corrig. Goodfellow 2021</authority>
              <status candidatus="false" conserved="false" current-name="Actinomycetota" current-name-doi="10.1601/nm.39793" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="NVP" />
            </name-status-group>
          </nomenclature>
          <ancestor doi="10.1601/tx.17916" rank="class">
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              <name-status-group>
                <identifier doi="10.1601/nm.17916" nomenclatural-type="10.1601/tx.5768" nomenclatural-type-exemplar="10.1601/ex.5772" rank="class" taxon-doi="10.1601/tx.17916">Actinomycetes</identifier>
                <authority>Krasil'nikov 1949 (Approved Lists 1980)</authority>
                <status candidatus="false" conserved="false" current-name="Actinomycetes" current-name-doi="10.1601/nm.17916" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
              </name-status-group>
            </nomenclature>
            <ancestor doi="10.1601/tx.27023" rank="order">
              <nomenclature xmlns="http://namesforlife.com/ns/common">
                <name-status-group>
                  <identifier doi="10.1601/nm.27023" nomenclatural-type="10.1601/tx.6188" nomenclatural-type-exemplar="10.1601/ex.6189" rank="order" taxon-doi="10.1601/tx.27023">Corynebacteriales</identifier>
                  <authority>Goodfellow and Jones 2015 emend. Nouioui et al. 2018</authority>
                  <status candidatus="false" conserved="false" current-name="Corynebacteriales" current-name-doi="10.1601/nm.27023" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                </name-status-group>
              </nomenclature>
              <ancestor doi="10.1601/tx.6309" rank="family">
                <nomenclature xmlns="http://namesforlife.com/ns/common">
                  <name-status-group>
                    <identifier doi="10.1601/nm.6309" nomenclatural-type="10.1601/tx.6310" nomenclatural-type-exemplar="10.1601/ex.6311" rank="family" taxon-doi="10.1601/tx.6309">Mycobacteriaceae</identifier>
                    <authority>Chester 1897 (Approved Lists 1980) emend. Gupta et al. 2018</authority>
                    <status candidatus="false" conserved="false" current-name="Mycobacteriaceae" current-name-doi="10.1601/nm.6309" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
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                </nomenclature>
                <ancestor doi="10.1601/tx.6310" rank="genus">
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                      <identifier doi="10.1601/nm.6310" nomenclatural-type="10.1601/tx.10886" nomenclatural-type-exemplar="10.1601/ex.6311" rank="genus" taxon-doi="10.1601/tx.6310">Mycobacterium</identifier>
                      <authority>Lehmann and Neumann 1896 (Approved Lists 1980) emend. Meehan et al. 2021</authority>
                      <status candidatus="false" conserved="false" current-name="Mycobacterium" current-name-doi="10.1601/nm.6310" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
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                  </nomenclature>
                  <ancestor doi="10.1601/tx.10879" rank="species">
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                      <name-status-group>
                        <identifier doi="10.1601/nm.10879" nomenclatural-type-exemplar="10.1601/ex.6321" rank="species" taxon-doi="10.1601/tx.10879">Mycobacterium avium</identifier>
                        <authority>Chester 1901 (Approved Lists 1980) emend. Thorel et al. 1990</authority>
                        <status candidatus="false" conserved="true" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
                      </name-status-group>
                    </nomenclature>
                    <ancestor doi="10.1601/tx.6321" rank="subspecies">
                      <nomenclature xmlns="http://namesforlife.com/ns/common">
                        <name-status-group>
                          <identifier doi="10.1601/nm.6321" nomenclatural-type-exemplar="10.1601/ex.6321" rank="subspecies" taxon-doi="10.1601/tx.6321">Mycobacterium avium avium</identifier>
                          <authority>(Chester 1901) Thorel et al. 1990</authority>
                          <status candidatus="false" conserved="false" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                        </name-status-group>
                      </nomenclature>
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                </ancestor>
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            </ancestor>
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    <parent doi="10.1601/tx.10879" rank="species">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.10879" nomenclatural-type-exemplar="10.1601/ex.6321" rank="species" taxon-doi="10.1601/tx.10879">Mycobacterium avium</identifier>
          <authority>Chester 1901 (Approved Lists 1980) emend. Thorel et al. 1990</authority>
          <status candidatus="false" conserved="true" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
    </parent>
    <sibling doi="10.1601/tx.6322" rank="subspecies">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.6322" nomenclatural-type-exemplar="10.1601/ex.6389" rank="subspecies" taxon-doi="10.1601/tx.6322">Mycobacterium avium paratuberculosis</identifier>
          <authority>(Bergey et al. 1923) Thorel et al. 1990</authority>
          <status candidatus="false" conserved="false" current-name="Mycobacterium avium paratuberculosis" current-name-doi="10.1601/nm.6322" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
    </sibling>
    <sibling doi="10.1601/tx.6323" rank="subspecies">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.6323" nomenclatural-type-exemplar="10.1601/ex.6323" rank="subspecies" taxon-doi="10.1601/tx.6323">Mycobacterium avium silvaticum</identifier>
          <authority>Thorel et al. 1990</authority>
          <status candidatus="false" conserved="false" current-name="Mycobacterium avium silvaticum" current-name-doi="10.1601/nm.6323" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
    </sibling>
    <sibling doi="10.1601/tx.14878" rank="subspecies">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.14878" nomenclatural-type-exemplar="10.1601/ex.14878" rank="subspecies" taxon-doi="10.1601/tx.14878">Mycobacterium avium hominissuis</identifier>
          <authority>Mijs et al. 2002</authority>
          <status candidatus="false" conserved="false" current-name="Mycobacterium avium hominissuis" current-name-doi="10.1601/nm.14878" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
        </name-status-group>
      </nomenclature>
    </sibling>
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      <exemplar doi="10.1601/ex.6321" is-uncultivated="false">
        <biosafety-level code="BSL-2" description="BioSafety Level 2" />
        <identifiers>
          <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="DSM 44156" source="dsmz" />
          <identifier is-laboratory-identifier="true" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="SSC 1336" source="dsmz" />
          <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="ATCC 25291" reference="rid.1300" source="reference" />
          <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="TMC 724" source="dsmz" />
          <identifier is-laboratory-identifier="true" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="Vet. 1387" source="atcc" />
        </identifiers>
        <features>
          <feature code="10.1601.fr.16S" description="16S gene" id="AJ536037" reference="rid.10040" source="reference" url="https://www.ncbi.nlm.nih.gov/nuccore/AJ536037" />
          <feature code="10.1601.fr.GCAT" description="Genome Catalogue Identifier" id="004107_GCAT" source="gold" />
          <feature code="10.1601.fr.gold" description="GOLD Card" id="Gi03338" source="gold" />
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        <nomenclature xmlns="http://namesforlife.com/ns/common">
          <name-status-group>
            <identifier doi="10.1601/nm.10879" nomenclatural-type-exemplar="10.1601/ex.6321" rank="species" taxon-doi="10.1601/tx.10879">Mycobacterium avium</identifier>
            <authority>Chester 1901 (Approved Lists 1980) emend. Thorel et al. 1990</authority>
            <status candidatus="false" conserved="true" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
          </name-status-group>
          <name-status-group>
            <identifier doi="10.1601/nm.6321" nomenclatural-type-exemplar="10.1601/ex.6321" rank="subspecies" taxon-doi="10.1601/tx.6321">Mycobacterium avium avium</identifier>
            <authority>(Chester 1901) Thorel et al. 1990</authority>
            <status candidatus="false" conserved="false" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
          </name-status-group>
        </nomenclature>
        <bibliography xmlns="http://namesforlife.com/ns/reference">
          <reference id="rid.10040">
            <citation citation-type="journal">
              <authors>
                <person-name>
                  <surname>Lefmann</surname>
                  <given-names>M.</given-names>
                </person-name>
                <person-name>
                  <surname>Honisch</surname>
                  <given-names>C.</given-names>
                </person-name>
                <person-name>
                  <surname>Böcker</surname>
                  <given-names>S.</given-names>
                </person-name>
                <person-name>
                  <surname>Storm</surname>
                  <given-names>N.</given-names>
                </person-name>
                <person-name>
                  <surname>von Wintzingerode</surname>
                  <given-names>F.</given-names>
                </person-name>
                <person-name>
                  <surname>Schlötelburg</surname>
                  <given-names>C.</given-names>
                </person-name>
                <person-name>
                  <surname>Moter</surname>
                  <given-names>A.</given-names>
                </person-name>
                <person-name>
                  <surname>van den Boom</surname>
                  <given-names>D.</given-names>
                </person-name>
                <person-name>
                  <surname>Göbel</surname>
                  <given-names>U.B.</given-names>
                </person-name>
              </authors>
              <article-title>Novel Mass Spectrometry-Based Tool for Genotypic Identification of Mycobacteria</article-title>
              <year>2004</year>
              <volume>42</volume>
              <fpage>339</fpage>
              <lpage>346</lpage>
              <source id="183">Journal of Clinical Microbiology</source>
              <abbrev>J Clin Microbiol</abbrev>
              <issn>0095-1137</issn>
              <essn>1098-660X</essn>
              <pub-id pub-id-type="doi">10.1128/JCM.42.1.339-346.2004</pub-id>
              <pub-id pub-id-type="pmid">14715774</pub-id>
            </citation>
          </reference>
          <reference id="rid.1300">
            <citation citation-type="journal">
              <authors>
                <person-name>
                  <surname>Skerman</surname>
                  <given-names>V.B.D.</given-names>
                </person-name>
                <person-name>
                  <surname>McGowan</surname>
                  <given-names>V.</given-names>
                </person-name>
                <person-name>
                  <surname>Sneath</surname>
                  <given-names>P.H.A.</given-names>
                </person-name>
              </authors>
              <article-title>Approved Lists of Bacterial Names</article-title>
              <year>1980</year>
              <volume>30</volume>
              <issue>1</issue>
              <fpage>225</fpage>
              <lpage>420</lpage>
              <source id="116">International Journal of Systematic Bacteriology</source>
              <abbrev>Int J Syst Bacteriol</abbrev>
              <issn>0020-7713</issn>
              <pub-id pub-id-type="doi">10.1099/00207713-30-1-225</pub-id>
            </citation>
          </reference>
          <reference id="rid.12444">
            <citation citation-type="journal">
              <authors>
                <person-name>
                  <surname>Liolios</surname>
                  <given-names>K.</given-names>
                </person-name>
                <person-name>
                  <surname>Chen</surname>
                  <given-names>I.M.</given-names>
                </person-name>
                <person-name>
                  <surname>Mavromatis</surname>
                  <given-names>K.</given-names>
                </person-name>
                <person-name>
                  <surname>Tavernarakis</surname>
                  <given-names>N.</given-names>
                </person-name>
                <person-name>
                  <surname>Hugenholtz</surname>
                  <given-names>P.</given-names>
                </person-name>
                <person-name>
                  <surname>Markowitz</surname>
                  <given-names>V.M.</given-names>
                </person-name>
                <person-name>
                  <surname>Kyrpides</surname>
                  <given-names>N.C.</given-names>
                </person-name>
              </authors>
              <article-title>The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata</article-title>
              <year>2010</year>
              <volume>38</volume>
              <fpage>D346</fpage>
              <lpage>354</lpage>
              <source id="1178">Nucleic Acids Research</source>
              <abbrev>Nucleic Acids Res.</abbrev>
              <issn>0305-1048</issn>
              <essn>1362-4962</essn>
              <pub-id pub-id-type="doi">10.1093/nar/gkp848</pub-id>
              <pub-id pub-id-type="pmid">19914934</pub-id>
            </citation>
          </reference>
        </bibliography>
        <annotation xmlns="http://namesforlife.com/ns/common">
          <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="15:52:54" time-formatted="15:52 PM" />
          <modified curator="Charles Parker" date="2016-11-03" date-formatted="November 3, 2016" time="12:43:23" time-formatted="12:43 PM" />
          <created curator="Dorothea Rohlfs" date="2010-01-08" date-formatted="January 8, 2010" time="13:34:29" time-formatted="13:34 PM" />
          <curatorial-note>Add patent features:
Nucleotide (GenBank) : AX111489 Sequence 2222 from Patent WO0123604.

Nucleotide (GenBank) : AX111510 Sequence 2243 from Patent WO0123604. 

Nucleotide (GenBank) : AX111530 Sequence 2263 from Patent WO0123604.</curatorial-note>
        </annotation>
      </exemplar>
    </exemplars>
    <bibliography xmlns="http://namesforlife.com/ns/reference">
      <reference id="rid.6795">
        <citation citation-type="journal">
          <authors>
            <person-name>
              <surname>Thorel</surname>
              <given-names>M.F.</given-names>
            </person-name>
            <person-name>
              <surname>Krichevsky</surname>
              <given-names>M.</given-names>
            </person-name>
            <person-name>
              <surname>Lévy-Frébault</surname>
              <given-names>V.V.</given-names>
            </person-name>
          </authors>
          <article-title>Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov.</article-title>
          <year>1990</year>
          <volume>40</volume>
          <issue>3</issue>
          <fpage>254</fpage>
          <lpage>260</lpage>
          <source id="116">International Journal of Systematic Bacteriology</source>
          <abbrev>Int J Syst Bacteriol</abbrev>
          <issn>0020-7713</issn>
          <pub-id pub-id-type="doi">10.1099/00207713-40-3-254</pub-id>
          <pub-id pub-id-type="pmid">2397193</pub-id>
        </citation>
      </reference>
    </bibliography>
    <annotation xmlns="http://namesforlife.com/ns/common">
      <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="15:52:55" time-formatted="15:52 PM" />
      <modified curator="Charles Parker" date="2018-10-25" date-formatted="October 25, 2018" time="16:22:08" time-formatted="16:22 PM" />
      <created curator="Sarah Wigley" date="2008-11-25" date-formatted="November 25, 2008" time="15:48:51" time-formatted="15:48 PM" />
    </annotation>
  </taxon>
  <synonyms>
    <synonyms-from>
      <synonym date="2018" from="10.1601/nm.6321" reference="rid.20196" to="10.1601/nm.14825" type="heterotypic">
        <name-status-group xmlns="http://namesforlife.com/ns/common">
          <identifier doi="10.1601/nm.14825" nomenclatural-type-exemplar="10.1601/ex.14825" rank="species" taxon-doi="10.1601/tx.14825">Mycobacterium bouchedurhonense</identifier>
          <authority>Ben Salah et al. 2009 emend. Nouioui et al. 2018</authority>
          <status candidatus="false" conserved="false" current-name="Mycobacterium bouchedurhonense" current-name-doi="10.1601/nm.14825" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </synonym>
    </synonyms-from>
    <synonyms-to>
      <synonym date="1990" from="10.1601/nm.10879" reference="rid.6795" to="10.1601/nm.6321" type="rank reduction">
        <name-status-group xmlns="http://namesforlife.com/ns/common">
          <identifier doi="10.1601/nm.10879" nomenclatural-type-exemplar="10.1601/ex.6321" rank="species" taxon-doi="10.1601/tx.10879">Mycobacterium avium</identifier>
          <authority>Chester 1901 (Approved Lists 1980) emend. Thorel et al. 1990</authority>
          <status candidatus="false" conserved="true" current-name="Mycobacterium avium avium" current-name-doi="10.1601/nm.6321" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
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