Taxon DOI
10.1601/tx.31286
Name
Woebken et al. 2008
Taxonomic Rank
genus
Methodology
Nomenclatural Taxonomy [1980-2022]
Incertae sedis taxa are placed using SOSCC (Garrity and Lilburn 2008)
Parent
Taxon RecordName Record
Jetten et al. 2010
Members
Woebken et al. 2008
Schmid et al. 2003
corrig. Ahmed et al. 2017
Oshiki et al. 2017
Dang et al. 2013
van de Vossenberg et al. 2013
Fuchsman et al. 2012
Speth et al. 2017
Zhao et al. 2020
Kuypers et al. 2003
Schmid et al. 2003
Type Status
Taxonomy
The taxonomic placement of this genus within the root Universal Root.

  Woese et al. 1990
  (None 2015) Woese et al. 1990
  (sic) Garrity and Holt 2021
  (Cavalier-Smith 2002) Ward 2020
  Jetten et al. 2010
  Jetten et al. 2010
  Woebken et al. 2008

The taxonomy from the rank of class and below is based upon currently published taxonomic opinion. For a complete taxonomy, refer to The Taxonomic Outline of Bacteria and Archaea, Release 7.7.
Citation
When referring to this Abstract, please use its Digital Object Identifier.
Taxon Abstract for the genus Scalindua Woebken et al. 2008. Retrieved . https://doi.org/10.1601/tx.31286.
Source File
This information was last reviewed on November 23, 2021.

References


  1. Speth DR, Lagkouvardos I, Wang Y, Qian P-Y, Dutilh BE, Jetten MSM. Draft Genome of Scalindua rubra, Obtained from the Interface Above the Discovery Deep Brine in the Red Sea, Sheds Light on Potential Salt Adaptation Strategies in Anammox Bacteria. Microb Ecol 2017; 74:1-5. https://doi.org/10.1007/s00248-017-0929-7 [PubMed].
  2. Schmid M, Walsh K, Webb R, Rijpstra W, van de Pas-Schoonen K, Verbruggen MJ, Hill T, Moffet B, Fuerst J, Shouten S, Damste JS, Harris J, Shaw P, Jetten M, Strous M. Candidatus "Scalindua brodae", sp. nov., Candidatus "Scalindua wagneri", sp. nov., two new species of anaerobic ammonium oxidizing bacteria. Syst Appl Microbiol 2003; 26:529-538. [PubMed].
  3. Zhao R, Mogollón JM, Abby SS, Schleper C, Biddle JF, Roerdink DL, Thorseth IH, Jørgensen SL. Geochemical transition zone powering microbial growth in subsurface sediments. Proc Natl Acad Sci U S A 2020; 117:32617-32626. https://doi.org/10.1073/pnas.2005917117 [PubMed].
  4. Ludwig W, Euzeby J, Whitman WB. Taxonomic outlines of the phyla Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), ­Acidobacteria, Fibrobacteres, Fusobacteria, ­Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. In: Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ, Ward NL, Ludwig W, Whitman WB (eds), Bergey's Manual of Systematic Bacteriology, Second Edition, Volume 4, Springer, New York, 2010, p. 21-24.
  5. Woebken D, Lam P, Kuypers MMM, Naqvi SWA, Kartal B, Strous M, Jetten MSM, Fuchs BM, Amann R. A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones. Environ Microbiol 2008; 10:3106-3119. https://doi.org/10.1111/j.1462-2920.2008.01640.x [PubMed].
  6. Fuchsman CA, Staley JT, Oakley BB, Kirkpatrick JB, Murray JW. Free-living and aggregate-associated Planctomycetes in the Black Sea. FEMS Microbiol Ecol 2012; 80:402-416. https://doi.org/10.1111/j.1574-6941.2012.01306.x [PubMed].
  7. Dang H, Zhou H, Zhang Z, Yu Z, Hua E, Liu X, Jiao N. Molecular detection of Candidatus Scalindua pacifica and environmental responses of sediment anammox bacterial community in the Bohai Sea, China. PLoS One 2013; 8:e61330-e61330. https://doi.org/10.1371/journal.pone.0061330 [PubMed].
  8. van de Vossenberg J, Rattray JE, Geerts W, Kartal B, van Niftrik L, van Donselaar EG, Sinninghe Damsté JS, Strous M, Jetten MSM. Enrichment and characterization of marine anammox bacteria associated with global nitrogen gas production. Environ Microbiol 2008; 10:3120-3129. https://doi.org/10.1111/j.1462-2920.2008.01643.x [PubMed].
  9. Oshiki M, Mizuto K, Kimura Z-I, Kindaichi T, Satoh H, Okabe S. Genetic diversity of marine anaerobic ammonium-oxidizing bacteria as revealed by genomic and proteomic analyses of 'Candidatus Scalindua japonica'. EMIR 2017; 9:550-561. https://doi.org/10.1111/1758-2229.12586 [PubMed].
  10. Ahmed S, Shakeela Q, Khan I, Nouroz F, Niaz Z. Molecular detection of Candidatus Scalindua flavia, study of anammox bacterial community structure, composition in the sediments of the East. Ind J Geo Mar Sci 2017; 46:33-47.