<?xml version="1.0" ?>
<!--
  (c) 2024, The Regents of the University of California, through Lawrence Berkeley National Laboratory (subject to receipt of any required approvals from the U.S. Dept. of Energy).
  All rights reserved.

  CLOCKSS system has permission to ingest, preserve, and serve this Archival Unit.
  LOCKSS system has permission to ingest, preserve, and serve this Archival Unit.

  This content is licensed under a Creative Commons Attribution 3.0 International license: https://creativecommons.org/licenses/by/3.0/
-->
<taxon doi="10.1601/tx.31804" rank="subspecies" xmlns="http://namesforlife.com/ns/taxon">
  <nomenclature xmlns="http://namesforlife.com/ns/common">
    <name-status-group>
      <identifier doi="10.1601/nm.31804" nomenclatural-type-exemplar="10.1601/ex.23701" rank="subspecies" taxon-doi="10.1601/tx.31804">Mycobacterium intracellulare yongonense</identifier>
      <authority>(Kim et al. 2013) Castejon et al. 2018</authority>
      <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare yongonense" current-name-doi="10.1601/nm.31804" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
    </name-status-group>
  </nomenclature>
  <nomenclatural-type nomenclatural-type-exemplar="10.1601/ex.23701" xmlns="http://namesforlife.com/ns/common" />
  <taxonomic-equivalence />
  <ancestor doi="10.1601/tx.0" rank="root">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.0" rank="root" taxon-doi="10.1601/tx.0">Universal Root</identifier>
        <authority>Woese et al. 1990</authority>
        <status candidatus="false" conserved="false" current-name="Universal Root" current-name-doi="10.1601/nm.0" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
      </name-status-group>
    </nomenclature>
    <ancestor doi="10.1601/tx.419" rank="domain">
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.419" rank="domain" taxon-doi="10.1601/tx.419">Bacteria</identifier>
          <authority>(None 2015) Woese et al. 1990</authority>
          <status candidatus="false" conserved="false" current-name="Bacteria" current-name-doi="10.1601/nm.419" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="NVP" />
        </name-status-group>
      </nomenclature>
      <ancestor doi="10.1601/tx.5711" rank="phylum">
        <nomenclature xmlns="http://namesforlife.com/ns/common">
          <name-status-group>
            <identifier doi="10.1601/nm.5711" nomenclatural-type="10.1601/tx.5771" nomenclatural-type-exemplar="10.1601/ex.5772" rank="phylum" taxon-doi="10.1601/tx.5711">Actinobacteria</identifier>
            <authority>(sic) Goodfellow 2021 non Actinobacteria Stackebrandt et al. 1997</authority>
            <status candidatus="false" conserved="false" current-name="Actinomycetota" current-name-doi="10.1601/nm.39793" illegitimate="true" is-current="false" rejected="false" revived="false" status-code="NVP" />
          </name-status-group>
          <name-status-group>
            <identifier doi="10.1601/nm.39793" nomenclatural-type="10.1601/tx.5771" nomenclatural-type-exemplar="10.1601/ex.5772" rank="phylum" taxon-doi="10.1601/tx.5711">Actinomycetota</identifier>
            <authority>corrig. Goodfellow 2021</authority>
            <status candidatus="false" conserved="false" current-name="Actinomycetota" current-name-doi="10.1601/nm.39793" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
          </name-status-group>
          <name-status-group>
            <identifier doi="10.1601/nm.31607" nomenclatural-type="10.1601/tx.5771" nomenclatural-type-exemplar="10.1601/ex.5772" rank="phylum" taxon-doi="10.1601/tx.5711">Actinobacteriota</identifier>
            <authority>corrig. Goodfellow 2021</authority>
            <status candidatus="false" conserved="false" current-name="Actinomycetota" current-name-doi="10.1601/nm.39793" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="NVP" />
          </name-status-group>
        </nomenclature>
        <ancestor doi="10.1601/tx.17916" rank="class">
          <nomenclature xmlns="http://namesforlife.com/ns/common">
            <name-status-group>
              <identifier doi="10.1601/nm.17916" nomenclatural-type="10.1601/tx.5768" nomenclatural-type-exemplar="10.1601/ex.5772" rank="class" taxon-doi="10.1601/tx.17916">Actinomycetes</identifier>
              <authority>Krasil'nikov 1949 (Approved Lists 1980)</authority>
              <status candidatus="false" conserved="false" current-name="Actinomycetes" current-name-doi="10.1601/nm.17916" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
            </name-status-group>
          </nomenclature>
          <ancestor doi="10.1601/tx.27023" rank="order">
            <nomenclature xmlns="http://namesforlife.com/ns/common">
              <name-status-group>
                <identifier doi="10.1601/nm.27023" nomenclatural-type="10.1601/tx.6188" nomenclatural-type-exemplar="10.1601/ex.6189" rank="order" taxon-doi="10.1601/tx.27023">Corynebacteriales</identifier>
                <authority>Goodfellow and Jones 2015 emend. Nouioui et al. 2018</authority>
                <status candidatus="false" conserved="false" current-name="Corynebacteriales" current-name-doi="10.1601/nm.27023" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
              </name-status-group>
            </nomenclature>
            <ancestor doi="10.1601/tx.6309" rank="family">
              <nomenclature xmlns="http://namesforlife.com/ns/common">
                <name-status-group>
                  <identifier doi="10.1601/nm.6309" nomenclatural-type="10.1601/tx.6310" nomenclatural-type-exemplar="10.1601/ex.6311" rank="family" taxon-doi="10.1601/tx.6309">Mycobacteriaceae</identifier>
                  <authority>Chester 1897 (Approved Lists 1980) emend. Gupta et al. 2018</authority>
                  <status candidatus="false" conserved="false" current-name="Mycobacteriaceae" current-name-doi="10.1601/nm.6309" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                </name-status-group>
              </nomenclature>
              <ancestor doi="10.1601/tx.6310" rank="genus">
                <nomenclature xmlns="http://namesforlife.com/ns/common">
                  <name-status-group>
                    <identifier doi="10.1601/nm.6310" nomenclatural-type="10.1601/tx.10886" nomenclatural-type-exemplar="10.1601/ex.6311" rank="genus" taxon-doi="10.1601/tx.6310">Mycobacterium</identifier>
                    <authority>Lehmann and Neumann 1896 (Approved Lists 1980) emend. Meehan et al. 2021</authority>
                    <status candidatus="false" conserved="false" current-name="Mycobacterium" current-name-doi="10.1601/nm.6310" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                  </name-status-group>
                </nomenclature>
                <ancestor doi="10.1601/tx.6366" rank="species">
                  <nomenclature xmlns="http://namesforlife.com/ns/common">
                    <name-status-group>
                      <identifier doi="10.1601/nm.6366" nomenclatural-type-exemplar="10.1601/ex.6366" rank="species" taxon-doi="10.1601/tx.6366">Mycobacterium intracellulare</identifier>
                      <authority>(Cuttino and McCabe 1949) Runyon 1965 (Approved Lists 1980) emend. Castejon et al. 2018</authority>
                      <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare intracellulare" current-name-doi="10.1601/nm.31805" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
                    </name-status-group>
                  </nomenclature>
                  <ancestor doi="10.1601/tx.31804" rank="subspecies">
                    <nomenclature xmlns="http://namesforlife.com/ns/common">
                      <name-status-group>
                        <identifier doi="10.1601/nm.31804" nomenclatural-type-exemplar="10.1601/ex.23701" rank="subspecies" taxon-doi="10.1601/tx.31804">Mycobacterium intracellulare yongonense</identifier>
                        <authority>(Kim et al. 2013) Castejon et al. 2018</authority>
                        <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare yongonense" current-name-doi="10.1601/nm.31804" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
                      </name-status-group>
                    </nomenclature>
                  </ancestor>
                </ancestor>
              </ancestor>
            </ancestor>
          </ancestor>
        </ancestor>
      </ancestor>
    </ancestor>
  </ancestor>
  <parent doi="10.1601/tx.6366" rank="species">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.6366" nomenclatural-type-exemplar="10.1601/ex.6366" rank="species" taxon-doi="10.1601/tx.6366">Mycobacterium intracellulare</identifier>
        <authority>(Cuttino and McCabe 1949) Runyon 1965 (Approved Lists 1980) emend. Castejon et al. 2018</authority>
        <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare intracellulare" current-name-doi="10.1601/nm.31805" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </parent>
  <sibling doi="10.1601/tx.31805" rank="subspecies">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.31805" nomenclatural-type-exemplar="10.1601/ex.6366" rank="subspecies" taxon-doi="10.1601/tx.31805">Mycobacterium intracellulare intracellulare</identifier>
        <authority>(Cuttino and McCabe 1949) Castejon et al. 2018</authority>
        <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare intracellulare" current-name-doi="10.1601/nm.31805" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <sibling doi="10.1601/tx.32820" rank="subspecies">
    <nomenclature xmlns="http://namesforlife.com/ns/common">
      <name-status-group>
        <identifier doi="10.1601/nm.32820" nomenclatural-type-exemplar="10.1601/ex.8715" rank="subspecies" taxon-doi="10.1601/tx.32820">Mycobacterium intracellulare chimaera</identifier>
        <authority>(Tortoli et al. 2004) Nouioui et al. 2018</authority>
        <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare chimaera" current-name-doi="10.1601/nm.32820" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
      </name-status-group>
    </nomenclature>
  </sibling>
  <exemplars xmlns="http://namesforlife.com/ns/exemplar">
    <exemplar doi="10.1601/ex.23701" is-uncultivated="false">
      <biosafety-level code="BSL-1" description="BioSafety Level 1" />
      <identifiers>
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="KCTC 19555" reference="rid.13717" source="reference" />
        <identifier is-laboratory-identifier="true" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="05-1390" reference="rid.13717" source="reference" />
        <identifier is-laboratory-identifier="false" is-mixed-culture="false" is-non-viable="false" is-patent="false" is-symbiont="false" is-unavailable="false" is-variant="false" label="DSM 45126" reference="rid.13717" source="reference" />
      </identifiers>
      <features>
        <feature code="10.1601.fr.sample" description="NCBI BioSample" id="SAMN02603187" reference="rid.20196" source="reference" />
        <feature code="10.1601.fr.16S" description="16S gene" id="JF738056" reference="rid.13717" source="reference" url="https://www.ncbi.nlm.nih.gov/nuccore/JF738056" />
        <feature code="10.1601.fr.assembly" description="Genome Assembly" id="GCA_000418535" source="genbank" />
      </features>
      <nomenclature xmlns="http://namesforlife.com/ns/common">
        <name-status-group>
          <identifier doi="10.1601/nm.31804" nomenclatural-type-exemplar="10.1601/ex.23701" rank="subspecies" taxon-doi="10.1601/tx.31804">Mycobacterium intracellulare yongonense</identifier>
          <authority>(Kim et al. 2013) Castejon et al. 2018</authority>
          <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare yongonense" current-name-doi="10.1601/nm.31804" illegitimate="false" is-current="true" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
        <name-status-group>
          <identifier doi="10.1601/nm.23701" nomenclatural-type-exemplar="10.1601/ex.23701" rank="species" taxon-doi="10.1601/tx.23701">Mycobacterium yongonense</identifier>
          <authority>Kim et al. 2013</authority>
          <status candidatus="false" conserved="false" current-name="Mycobacterium intracellulare yongonense" current-name-doi="10.1601/nm.31804" illegitimate="false" is-current="false" rejected="false" revived="false" status-code="VP" />
        </name-status-group>
      </nomenclature>
      <bibliography xmlns="http://namesforlife.com/ns/reference">
        <reference id="rid.20196">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Nouioui</surname>
                <given-names>I.</given-names>
              </person-name>
              <person-name>
                <surname>Carro</surname>
                <given-names>L.</given-names>
              </person-name>
              <person-name>
                <surname>García-López</surname>
                <given-names>M.</given-names>
              </person-name>
              <person-name>
                <surname>Meier-Kolthoff</surname>
                <given-names>J.P.</given-names>
              </person-name>
              <person-name>
                <surname>Woyke</surname>
                <given-names>T.</given-names>
              </person-name>
              <person-name>
                <surname>Kyrpides</surname>
                <given-names>N.C.</given-names>
              </person-name>
              <person-name>
                <surname>Pukall</surname>
                <given-names>R.</given-names>
              </person-name>
              <person-name>
                <surname>Klenk</surname>
                <given-names>H.-P.</given-names>
              </person-name>
              <person-name>
                <surname>Goodfellow</surname>
                <given-names>M.</given-names>
              </person-name>
              <person-name>
                <surname>Göker</surname>
                <given-names>M.</given-names>
              </person-name>
            </authors>
            <article-title>Genome-Based Taxonomic Classification of the Phylum Actinobacteria</article-title>
            <year>2018</year>
            <volume>9</volume>
            <fpage>2007</fpage>
            <lpage>2007</lpage>
            <source id="1354">Frontiers in Microbiology</source>
            <abbrev>Front. Microbio.</abbrev>
            <essn>1664-302X</essn>
            <pub-id pub-id-type="doi">10.3389/fmicb.2018.02007</pub-id>
            <pub-id pub-id-type="pmid">30186281</pub-id>
          </citation>
        </reference>
        <reference id="rid.13717">
          <citation citation-type="journal">
            <authors>
              <person-name>
                <surname>Kim</surname>
                <given-names>B.-J.</given-names>
              </person-name>
              <person-name>
                <surname>Math</surname>
                <given-names>R.K.</given-names>
              </person-name>
              <person-name>
                <surname>Jeon</surname>
                <given-names>C.O.</given-names>
              </person-name>
              <person-name>
                <surname>Yu</surname>
                <given-names>H.-K.</given-names>
              </person-name>
              <person-name>
                <surname>Park</surname>
                <given-names>Y.-G.</given-names>
              </person-name>
              <person-name>
                <surname>Kook</surname>
                <given-names>Y.-H.</given-names>
              </person-name>
              <person-name>
                <surname>Kim</surname>
                <given-names>B.-J.</given-names>
              </person-name>
            </authors>
            <article-title>Mycobacterium yongonense sp. nov., a slow-growing non-chromogenic species closely related to Mycobacterium intracellulare</article-title>
            <year>2013</year>
            <volume>63</volume>
            <issue>1</issue>
            <fpage>192</fpage>
            <lpage>199</lpage>
            <source id="117">International Journal of Systematic and Evolutionary Microbiology</source>
            <abbrev>Int J Syst Evol Microbiol</abbrev>
            <issn>1466-5026</issn>
            <essn>1466-5034</essn>
            <pub-id pub-id-type="doi">10.1099/ijs.0.037465-0</pub-id>
            <pub-id pub-id-type="pmid">22427442</pub-id>
          </citation>
        </reference>
      </bibliography>
      <annotation xmlns="http://namesforlife.com/ns/common">
        <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="22:01:03" time-formatted="22:01 PM" />
        <modified curator="Charles Parker" date="2018-09-17" date-formatted="September 17, 2018" time="17:52:35" time-formatted="17:52 PM" />
        <created curator="NamesforLife Curator" date="2013-01-24" date-formatted="January 24, 2013" time="15:07:52" time-formatted="15:07 PM" />
      </annotation>
    </exemplar>
  </exemplars>
  <bibliography xmlns="http://namesforlife.com/ns/reference">
    <reference id="rid.19843">
      <citation citation-type="journal">
        <authors>
          <person-name>
            <surname>Castejon</surname>
            <given-names>M.</given-names>
          </person-name>
          <person-name>
            <surname>Menéndez</surname>
            <given-names>M.C.</given-names>
          </person-name>
          <person-name>
            <surname>Comas</surname>
            <given-names>I.</given-names>
          </person-name>
          <person-name>
            <surname>Vicente</surname>
            <given-names>A.</given-names>
          </person-name>
          <person-name>
            <surname>Garcia</surname>
            <given-names>M.J.</given-names>
          </person-name>
        </authors>
        <article-title>Whole-genome sequence analysis of the Mycobacterium avium complex and proposal of the transfer of Mycobacterium yongonense to Mycobacterium intracellulare subsp. yongonense subsp. nov.</article-title>
        <year>2018</year>
        <volume>68</volume>
        <issue>6</issue>
        <fpage>1998</fpage>
        <lpage>2005</lpage>
        <source id="117">International Journal of Systematic and Evolutionary Microbiology</source>
        <abbrev>Int J Syst Evol Microbiol</abbrev>
        <issn>1466-5026</issn>
        <essn>1466-5034</essn>
        <pub-id pub-id-type="doi">10.1099/ijsem.0.002767</pub-id>
        <pub-id pub-id-type="pmid">29683417</pub-id>
      </citation>
    </reference>
  </bibliography>
  <annotation xmlns="http://namesforlife.com/ns/common">
    <snapshot date="2024-04-22" date-formatted="April 22, 2024" time="22:01:03" time-formatted="22:01 PM" />
    <modified curator="Charles Parker" date="2018-09-14" date-formatted="September 14, 2018" time="17:39:46" time-formatted="17:39 PM" />
    <created curator="Charles Parker" date="2018-05-17" date-formatted="May 17, 2018" time="17:20:34" time-formatted="17:20 PM" />
  </annotation>
</taxon>
